Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621609 chr22:33347552 A/G SAMM50 chr22:44351301-44406411:+ 0.63 8.44 3.87E-16 Box Plot
THCA rs9621609 chr22:33347552 A/G SAPS2 chr22:50781760-50883514:+ 0.73 8.48 2.9E-16 Box Plot
THCA rs9621609 chr22:33347552 A/G SCO2 chr22:50961997-50964868:- 0.42 7.52 2.64E-13 Box Plot
THCA rs9621609 chr22:33347552 A/G SELO chr22:50639408-50656045:+ 0.57 9.25 7.6E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G SF3A1 chr22:30727977-30752936:- 0.49 7.42 5.53E-13 Box Plot
THCA rs9621609 chr22:33347552 A/G SGSM3 chr22:40766595-40806293:+ 0.51 7.69 8.75E-14 Box Plot
THCA rs9621609 chr22:33347552 A/G SH3BP1 chr22:38030661-38062939:+ 0.33 5.88 7.56E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G SLC25A17 chr22:41165634-41215403:- 0.6 7.52 2.68E-13 Box Plot
THCA rs9621609 chr22:33347552 A/G SLC2A11 chr22:24198890-24228496:+ 0.67 7.11 4.32E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G SMARCB1 chr22:24129150-24176703:+ 0.61 7.13 3.76E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G SMCR7L chr22:39896105-39914136:+ 0.63 9.02 4.41E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G SNAP29 chr22:21213271-21245506:+ 0.66 6.61 1.05E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G SNRPD3 chr22:24951471-25005947:+ 0.6 8.09 4.88E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G SPAG7 chr17:4862521-4871167:- -0.4 -5.93 5.71E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G SRRD chr22:26879843-26890624:+ 0.77 8.7 5.47E-17 Box Plot